Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.91□□□□□ -0.66
Vbp1P61759 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 Gm8420-201ENSMUST00000097103 598 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.91□□□□□ -0.66
Vbp1P61759 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Vbp1P61759 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.91□□□□□ -0.66
Vbp1P61759 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vbp1P61759 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Vbp1P61759 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vbp1P61759 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.9□□□□□ -0.66
Vbp1P61759 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vbp1P61759 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.9□□□□□ -0.66
Vbp1P61759 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm15371-201ENSMUST00000117057 784 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm5687-201ENSMUST00000118252 640 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm17837-201ENSMUST00000186435 985 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Gm5264-201ENSMUST00000190584 848 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm8099-201ENSMUST00000200510 742 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.9□□□□□ -0.66
Vbp1P61759 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Gm9063-201ENSMUST00000223299 582 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.9□□□□□ -0.66
Vbp1P61759 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Vbp1P61759 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vbp1P61759 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Vbp1P61759 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vbp1P61759 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Vbp1P61759 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.9□□□□□ -0.67
Vbp1P61759 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vbp1P61759 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Vbp1P61759 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.9□□□□□ -0.67
Vbp1P61759 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Vbp1P61759 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vbp1P61759 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vbp1P61759 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Vbp1P61759 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.89□□□□□ -0.67
Vbp1P61759 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Vbp1P61759 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vbp1P61759 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Vbp1P61759 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Vbp1P61759 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.89□□□□□ -0.67
Vbp1P61759 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.89□□□□□ -0.67
Vbp1P61759 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vbp1P61759 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms