Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Gm14441-201ENSMUST00000121960 540 ntBASIC14.24□□□□□ -0.13
Rhbdl3P58873 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.24□□□□□ -0.13
Rhbdl3P58873 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.24□□□□□ -0.13
Rhbdl3P58873 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.24□□□□□ -0.13
Rhbdl3P58873 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.24□□□□□ -0.13
Rhbdl3P58873 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Gm45219-201ENSMUST00000205602 465 ntBASIC14.24□□□□□ -0.13
Rhbdl3P58873 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhbdl3P58873 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Gm12419-201ENSMUST00000116649 636 ntBASIC14.23□□□□□ -0.13
Rhbdl3P58873 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.23□□□□□ -0.13
Rhbdl3P58873 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.23□□□□□ -0.13
Rhbdl3P58873 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.23□□□□□ -0.13
Rhbdl3P58873 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rhbdl3P58873 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gm9645-201ENSMUST00000197131 792 ntBASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gm44329-201ENSMUST00000197469 112 ntBASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rhbdl3P58873 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms