Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.44□□□□□ -0.26
Tpm1P58771 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.44□□□□□ -0.26
Tpm1P58771 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.44□□□□□ -0.26
Tpm1P58771 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm1P58771 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm1P58771 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.43□□□□□ -0.26
Tpm1P58771 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.43□□□□□ -0.26
Tpm1P58771 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.43□□□□□ -0.26
Tpm1P58771 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.43□□□□□ -0.26
Tpm1P58771 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.43□□□□□ -0.26
Tpm1P58771 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.43□□□□□ -0.26
Tpm1P58771 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.43□□□□□ -0.26
Tpm1P58771 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.43□□□□□ -0.26
Tpm1P58771 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.43□□□□□ -0.26
Tpm1P58771 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tpm1P58771 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tpm1P58771 Gm9083-201ENSMUST00000120423 819 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 Gm11597-201ENSMUST00000121423 964 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 Mir1894-201ENSMUST00000122802 81 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.42□□□□□ -0.26
Tpm1P58771 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Gm5904-201ENSMUST00000210286 865 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Tpm1P58771 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.42□□□□□ -0.26
Tpm1P58771 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.42□□□□□ -0.26
Tpm1P58771 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tpm1P58771 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.42□□□□□ -0.26
Tpm1P58771 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tpm1P58771 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tpm1P58771 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms