Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Atxn1P54254 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Atxn1P54254 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atxn1P54254 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atxn1P54254 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm23596-201ENSMUST00000104304 132 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Gm14585-201ENSMUST00000120713 634 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Gm4726-201ENSMUST00000135604 736 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.02□□□□□ -0.49
Atxn1P54254 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm6019-201ENSMUST00000148369 736 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm23771-201ENSMUST00000178702 110 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm27910-201ENSMUST00000185004 107 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm17831-201ENSMUST00000205579 900 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.02□□□□□ -0.49
Atxn1P54254 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm8894-201ENSMUST00000074642 666 ntBASIC12.02□□□□□ -0.49
Atxn1P54254 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atxn1P54254 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.02□□□□□ -0.49
Atxn1P54254 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.02□□□□□ -0.49
Atxn1P54254 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atxn1P54254 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Atxn1P54254 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Atxn1P54254 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Atxn1P54254 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Atxn1P54254 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atxn1P54254 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Gm11980-201ENSMUST00000121445 986 ntBASIC12.01□□□□□ -0.49
Atxn1P54254 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.01□□□□□ -0.49
Atxn1P54254 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.01□□□□□ -0.49
Atxn1P54254 Gm45120-201ENSMUST00000208880 408 ntBASIC12.01□□□□□ -0.49
Atxn1P54254 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Atxn1P54254 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Atxn1P54254 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atxn1P54254 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.01□□□□□ -0.49
Atxn1P54254 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.01□□□□□ -0.49
Atxn1P54254 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Atxn1P54254 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.01□□□□□ -0.49
Atxn1P54254 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atxn1P54254 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12□□□□□ -0.49
Atxn1P54254 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Gm43823-201ENSMUST00000197391 1808 ntBASIC12□□□□□ -0.49
Atxn1P54254 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms