Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lhx3P50481 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lhx3P50481 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.2□□□□□ -0.46
Lhx3P50481 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Lhx3P50481 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lhx3P50481 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.19□□□□□ -0.46
Lhx3P50481 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Lhx3P50481 Gm8566-201ENSMUST00000120174 465 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Gm11450-201ENSMUST00000121144 333 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Gm16570-201ENSMUST00000161951 436 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Mir5120-201ENSMUST00000175020 78 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Gm7848-201ENSMUST00000210739 718 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.19□□□□□ -0.46
Lhx3P50481 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Lhx3P50481 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Gm21811-201ENSMUST00000096485 930 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lhx3P50481 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.19□□□□□ -0.46
Lhx3P50481 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lhx3P50481 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.19□□□□□ -0.46
Lhx3P50481 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.19□□□□□ -0.46
Lhx3P50481 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lhx3P50481 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lhx3P50481 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.18□□□□□ -0.46
Lhx3P50481 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lhx3P50481 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.18□□□□□ -0.46
Lhx3P50481 Gm12501-201ENSMUST00000119163 529 ntBASIC12.18□□□□□ -0.46
Lhx3P50481 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lhx3P50481 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.18□□□□□ -0.46
Lhx3P50481 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.18□□□□□ -0.46
Lhx3P50481 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lhx3P50481 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lhx3P50481 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Lhx3P50481 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx3P50481 Gm14724-201ENSMUST00000118400 537 ntBASIC12.17□□□□□ -0.46
Lhx3P50481 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.17□□□□□ -0.46
Lhx3P50481 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lhx3P50481 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms