Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shmt1P50431 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm18038-201ENSMUST00000197900 485 ntBASIC12.74□□□□□ -0.37
Shmt1P50431 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shmt1P50431 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Shmt1P50431 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.74□□□□□ -0.37
Shmt1P50431 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Shmt1P50431 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.73□□□□□ -0.37
Shmt1P50431 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.73□□□□□ -0.37
Shmt1P50431 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm23596-201ENSMUST00000104304 132 ntBASIC12.73□□□□□ -0.37
Shmt1P50431 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Shmt1P50431 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm12266-201ENSMUST00000120311 962 ntBASIC12.73□□□□□ -0.37
Shmt1P50431 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.73□□□□□ -0.37
Shmt1P50431 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm8956-201ENSMUST00000203939 825 ntBASIC12.73□□□□□ -0.37
Shmt1P50431 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.73□□□□□ -0.37
Shmt1P50431 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Shmt1P50431 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shmt1P50431 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Shmt1P50431 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm15004-201ENSMUST00000119192 630 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Gm11331-201ENSMUST00000119764 288 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Gm15610-201ENSMUST00000120584 195 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shmt1P50431 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Shmt1P50431 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm9797-202ENSMUST00000218003 294 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Gm26448-201ENSMUST00000082446 203 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms