Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Gm24934-201ENSMUST00000103764 111 ntBASIC12.32□□□□□ -0.44
SftpbP50405 Gm12058-201ENSMUST00000118614 437 ntBASIC12.32□□□□□ -0.44
SftpbP50405 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Gm13316-201ENSMUST00000140537 691 ntBASIC12.32□□□□□ -0.44
SftpbP50405 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.32□□□□□ -0.44
SftpbP50405 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.32□□□□□ -0.44
SftpbP50405 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.32□□□□□ -0.44
SftpbP50405 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.32□□□□□ -0.44
SftpbP50405 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SftpbP50405 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SftpbP50405 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.32□□□□□ -0.44
SftpbP50405 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.31□□□□□ -0.44
SftpbP50405 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SftpbP50405 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpbP50405 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Gm14660-201ENSMUST00000119809 575 ntBASIC12.31□□□□□ -0.44
SftpbP50405 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.31□□□□□ -0.44
SftpbP50405 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.31□□□□□ -0.44
SftpbP50405 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SftpbP50405 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.31□□□□□ -0.44
SftpbP50405 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SftpbP50405 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SftpbP50405 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.3□□□□□ -0.44
SftpbP50405 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SftpbP50405 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.3□□□□□ -0.44
SftpbP50405 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Gm45784-201ENSMUST00000188360 142 ntBASIC12.3□□□□□ -0.44
SftpbP50405 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.3□□□□□ -0.44
SftpbP50405 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.3□□□□□ -0.44
SftpbP50405 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SftpbP50405 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.3□□□□□ -0.44
SftpbP50405 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.3□□□□□ -0.44
SftpbP50405 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms