Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm10156-201ENSMUST00000122364 462 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm6244-201ENSMUST00000178732 841 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm27892-201ENSMUST00000185017 106 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm6007-201ENSMUST00000208170 823 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm11814-201ENSMUST00000119515 929 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm27331-201ENSMUST00000183705 60 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm27486-201ENSMUST00000184923 80 ntBASIC9.97□□□□□ -0.81
Nkx2-1P50220 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms