Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gli1P47806 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Gli1P47806 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Gli1P47806 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Gm11637-201ENSMUST00000120601 592 ntBASIC11.8□□□□□ -0.52
Gli1P47806 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.8□□□□□ -0.52
Gli1P47806 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.8□□□□□ -0.52
Gli1P47806 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.8□□□□□ -0.52
Gli1P47806 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.8□□□□□ -0.52
Gli1P47806 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.8□□□□□ -0.52
Gli1P47806 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gli1P47806 Gm16505-201ENSMUST00000179981 232 ntBASIC11.8□□□□□ -0.52
Gli1P47806 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.8□□□□□ -0.52
Gli1P47806 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.8□□□□□ -0.52
Gli1P47806 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Morn2-202ENSMUST00000227729 656 ntBASIC11.8□□□□□ -0.52
Gli1P47806 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gli1P47806 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Gli1P47806 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.8□□□□□ -0.52
Gli1P47806 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gli1P47806 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gli1P47806 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Gli1P47806 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.79□□□□□ -0.52
Gli1P47806 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.79□□□□□ -0.52
Gli1P47806 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Gli1P47806 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Gli1P47806 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.79□□□□□ -0.52
Gli1P47806 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 Nsd1-205ENSMUST00000224693 852 ntBASIC11.79□□□□□ -0.52
Gli1P47806 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Gli1P47806 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.79□□□□□ -0.52
Gli1P47806 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.79□□□□□ -0.52
Gli1P47806 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.79□□□□□ -0.52
Gli1P47806 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gli1P47806 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gli1P47806 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms