Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.45□□□□□ -0.58
Cdx2P43241 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdx2P43241 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdx2P43241 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdx2P43241 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.45□□□□□ -0.58
Cdx2P43241 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
Cdx2P43241 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdx2P43241 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Cdx2P43241 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm5706-201ENSMUST00000181525 993 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm37458-201ENSMUST00000194055 410 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Cdx2P43241 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdx2P43241 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.44□□□□□ -0.58
Cdx2P43241 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Cdx2P43241 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdx2P43241 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdx2P43241 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Cdx2P43241 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdx2P43241 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Gm12407-201ENSMUST00000180219 324 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.43□□□□□ -0.58
Cdx2P43241 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.43□□□□□ -0.58
Cdx2P43241 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms