Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.69□□□□□ -0.86
Cd27P41272 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Gm43962-201ENSMUST00000203898 190 ntBASIC9.69□□□□□ -0.86
Cd27P41272 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.69□□□□□ -0.86
Cd27P41272 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.69□□□□□ -0.86
Cd27P41272 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.69□□□□□ -0.86
Cd27P41272 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cd27P41272 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Cd27P41272 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Cd27P41272 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.68□□□□□ -0.86
Cd27P41272 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Gm5616-201ENSMUST00000165252 384 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Gm8741-201ENSMUST00000174736 384 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.68□□□□□ -0.86
Cd27P41272 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.68□□□□□ -0.86
Cd27P41272 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Gm17812-201ENSMUST00000204935 318 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.68□□□□□ -0.86
Cd27P41272 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.68□□□□□ -0.86
Cd27P41272 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.68□□□□□ -0.86
Cd27P41272 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.68□□□□□ -0.86
Cd27P41272 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Cd27P41272 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Cd27P41272 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Cd27P41272 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.67□□□□□ -0.86
Cd27P41272 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cd27P41272 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms