Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gm12314-201ENSMUST00000118104 538 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Gm12363-201ENSMUST00000122250 668 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.11□□□□□ -0.47
RxrbP28704 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gm25927-201ENSMUST00000175058 117 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gm44958-201ENSMUST00000203734 736 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.11□□□□□ -0.47
RxrbP28704 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RxrbP28704 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RxrbP28704 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.11□□□□□ -0.47
RxrbP28704 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RxrbP28704 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RxrbP28704 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.1□□□□□ -0.47
RxrbP28704 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.1□□□□□ -0.47
RxrbP28704 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RxrbP28704 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Gm8018-201ENSMUST00000173536 789 ntBASIC12.1□□□□□ -0.47
RxrbP28704 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Gm42693-201ENSMUST00000196779 631 ntBASIC12.1□□□□□ -0.47
RxrbP28704 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.1□□□□□ -0.47
RxrbP28704 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.1□□□□□ -0.47
RxrbP28704 Gm5035-201ENSMUST00000215581 927 ntBASIC12.1□□□□□ -0.47
RxrbP28704 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.1□□□□□ -0.47
RxrbP28704 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.1□□□□□ -0.47
RxrbP28704 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Gm6091-201ENSMUST00000098307 165 ntBASIC12.1□□□□□ -0.47
RxrbP28704 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RxrbP28704 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RxrbP28704 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.1□□□□□ -0.47
RxrbP28704 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
RxrbP28704 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
RxrbP28704 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RxrbP28704 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RxrbP28704 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RxrbP28704 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Gm45930-201ENSMUST00000221330 292 ntBASIC12.09□□□□□ -0.47
RxrbP28704 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RxrbP28704 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
RxrbP28704 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrbP28704 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms