Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Col8a2P25318 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.06□□□□□ -0.8
Col8a2P25318 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm17040-202ENSMUST00000170597 889 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Gm9136-201ENSMUST00000193368 454 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Gm18753-201ENSMUST00000201000 566 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm18730-201ENSMUST00000218038 343 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Col8a2P25318 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.06□□□□□ -0.8
Col8a2P25318 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.06□□□□□ -0.8
Col8a2P25318 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Col8a2P25318 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col8a2P25318 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Col8a2P25318 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm17931-201ENSMUST00000208132 634 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Gm7848-201ENSMUST00000210739 718 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm9797-202ENSMUST00000218003 294 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.05□□□□□ -0.8
Col8a2P25318 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.05□□□□□ -0.8
Col8a2P25318 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Col8a2P25318 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col8a2P25318 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col8a2P25318 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Col8a2P25318 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.05□□□□□ -0.8
Col8a2P25318 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.05□□□□□ -0.8
Col8a2P25318 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Col8a2P25318 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Col8a2P25318 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms