Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.2□□□□□ -0.46
VimP20152 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.2□□□□□ -0.46
VimP20152 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.2□□□□□ -0.46
VimP20152 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
VimP20152 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
VimP20152 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.2□□□□□ -0.46
VimP20152 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.2□□□□□ -0.46
VimP20152 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
VimP20152 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
VimP20152 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.19□□□□□ -0.46
VimP20152 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VimP20152 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.19□□□□□ -0.46
VimP20152 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VimP20152 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.19□□□□□ -0.46
VimP20152 Gm6983-201ENSMUST00000214912 628 ntBASIC12.19□□□□□ -0.46
VimP20152 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.19□□□□□ -0.46
VimP20152 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.19□□□□□ -0.46
VimP20152 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
VimP20152 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
VimP20152 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.19□□□□□ -0.46
VimP20152 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VimP20152 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.18□□□□□ -0.46
VimP20152 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VimP20152 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
VimP20152 Gm22175-201ENSMUST00000175007 78 ntBASIC12.18□□□□□ -0.46
VimP20152 Gm22121-201ENSMUST00000175148 54 ntBASIC12.18□□□□□ -0.46
VimP20152 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.18□□□□□ -0.46
VimP20152 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.18□□□□□ -0.46
VimP20152 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.18□□□□□ -0.46
VimP20152 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VimP20152 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.18□□□□□ -0.46
VimP20152 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VimP20152 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
VimP20152 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
VimP20152 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
VimP20152 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
VimP20152 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
VimP20152 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
VimP20152 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms