Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Ccl3P10855 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Ccl3P10855 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Ccl3P10855 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.63□□□□□ -0.71
Ccl3P10855 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccl3P10855 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm11340-201ENSMUST00000119226 412 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Gm13937-201ENSMUST00000121000 988 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.62□□□□□ -0.71
Ccl3P10855 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm22442-201ENSMUST00000157256 144 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm6407-201ENSMUST00000176468 549 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm37458-201ENSMUST00000194055 410 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm43852-201ENSMUST00000202098 917 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.62□□□□□ -0.71
Ccl3P10855 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Gm25517-201ENSMUST00000083865 134 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl3P10855 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.62□□□□□ -0.71
Ccl3P10855 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ccl3P10855 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl3P10855 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Ccl3P10855 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccl3P10855 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Ccl3P10855 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccl3P10855 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.61□□□□□ -0.71
Ccl3P10855 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccl3P10855 Gm25880-201ENSMUST00000104331 132 ntBASIC10.61□□□□□ -0.71
Ccl3P10855 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccl3P10855 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Ccl3P10855 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccl3P10855 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl3P10855 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccl3P10855 Gm19009-201ENSMUST00000223072 823 ntBASIC10.61□□□□□ -0.71
Ccl3P10855 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.61□□□□□ -0.71
Ccl3P10855 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.61□□□□□ -0.71
Ccl3P10855 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms