Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smim1P0C8K7 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gm5648-201ENSMUST00000122244 1587 ntBASIC8.24□□□□□ -1.09
Smim1P0C8K7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gm11524-201ENSMUST00000119349 807 ntBASIC8.24□□□□□ -1.09
Smim1P0C8K7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gm27533-201ENSMUST00000183800 152 ntBASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gm6652-201ENSMUST00000186414 1070 ntBASIC8.24□□□□□ -1.09
Smim1P0C8K7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC8.24□□□□□ -1.09
Smim1P0C8K7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC8.24□□□□□ -1.09
Smim1P0C8K7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smim1P0C8K7 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Smim1P0C8K7 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
Smim1P0C8K7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smim1P0C8K7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms