Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hoxc9P09633 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hoxc9P09633 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Hoxc9P09633 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm14441-201ENSMUST00000121960 540 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm5100-201ENSMUST00000195631 589 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm44315-201ENSMUST00000203041 219 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm45594-201ENSMUST00000211717 241 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.53■□□□□ 0.08
Hoxc9P09633 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.53■□□□□ 0.08
Hoxc9P09633 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Gm12036-201ENSMUST00000120008 530 ntBASIC15.52■□□□□ 0.08
Hoxc9P09633 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.52■□□□□ 0.08
Hoxc9P09633 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.52■□□□□ 0.08
Hoxc9P09633 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hoxc9P09633 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hoxc9P09633 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hoxc9P09633 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.52■□□□□ 0.07
Hoxc9P09633 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.52■□□□□ 0.07
Hoxc9P09633 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Hoxc9P09633 Gm45199-201ENSMUST00000207640 1507 ntBASIC15.52■□□□□ 0.07
Hoxc9P09633 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hoxc9P09633 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hoxc9P09633 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hoxc9P09633 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hoxc9P09633 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.51■□□□□ 0.07
Hoxc9P09633 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm22442-201ENSMUST00000157256 144 ntBASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm15744-201ENSMUST00000161734 213 ntBASIC15.51■□□□□ 0.07
Hoxc9P09633 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm5982-201ENSMUST00000196234 512 ntBASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms