Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
NclP09405 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NclP09405 Gm8038-201ENSMUST00000164674 2044 ntBASIC17.89■□□□□ 0.45
NclP09405 AC091458.1-201ENSMUST00000220902 1361 ntBASIC17.89■□□□□ 0.45
NclP09405 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Gm11660-201ENSMUST00000120955 412 ntBASIC17.88■□□□□ 0.45
NclP09405 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NclP09405 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.88■□□□□ 0.45
NclP09405 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NclP09405 AC173482.6-201ENSMUST00000225889 1741 ntBASIC17.88■□□□□ 0.45
NclP09405 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Gm10152-201ENSMUST00000193475 1344 ntBASIC17.88■□□□□ 0.45
NclP09405 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
NclP09405 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
NclP09405 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NclP09405 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
NclP09405 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NclP09405 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
NclP09405 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 AC117194.1-201ENSMUST00000224847 3002 ntBASIC17.87■□□□□ 0.45
NclP09405 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.87■□□□□ 0.45
NclP09405 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Gm27530-201ENSMUST00000184096 98 ntBASIC17.87■□□□□ 0.45
NclP09405 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.87■□□□□ 0.45
NclP09405 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NclP09405 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NclP09405 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
NclP09405 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC17.87■□□□□ 0.45
NclP09405 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
NclP09405 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Gm11663-201ENSMUST00000117888 290 ntBASIC17.86■□□□□ 0.45
NclP09405 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
NclP09405 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC17.86■□□□□ 0.45
NclP09405 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.86■□□□□ 0.45
NclP09405 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC17.86■□□□□ 0.45
NclP09405 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC17.86■□□□□ 0.45
NclP09405 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NclP09405 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC17.86■□□□□ 0.45
NclP09405 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.86■□□□□ 0.45
NclP09405 Gm5780-201ENSMUST00000217774 1834 ntBASIC17.86■□□□□ 0.45
NclP09405 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
NclP09405 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NclP09405 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NclP09405 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
NclP09405 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
NclP09405 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NclP09405 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Gm15610-201ENSMUST00000120584 195 ntBASIC17.85■□□□□ 0.45
NclP09405 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NclP09405 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NclP09405 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms