Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm807-202ENSMUST00000224929 408 ntBASIC11.88□□□□□ -0.51
Hoxa4P06798 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxa4P06798 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxa4P06798 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm9797-202ENSMUST00000218003 294 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.87□□□□□ -0.51
Hoxa4P06798 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa4P06798 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa4P06798 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm8566-201ENSMUST00000120174 465 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm12196-201ENSMUST00000120954 262 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm2965-201ENSMUST00000198365 343 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms