Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
P04214 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Gm14270-201ENSMUST00000118388 846 ntBASIC12.54□□□□□ -0.4
P04214 Gm15036-201ENSMUST00000118880 400 ntBASIC12.54□□□□□ -0.4
P04214 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.54□□□□□ -0.4
P04214 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.54□□□□□ -0.4
P04214 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.54□□□□□ -0.4
P04214 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.54□□□□□ -0.4
P04214 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.54□□□□□ -0.4
P04214 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.54□□□□□ -0.4
P04214 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Gm45500-201ENSMUST00000211676 803 ntBASIC12.54□□□□□ -0.4
P04214 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.54□□□□□ -0.4
P04214 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.54□□□□□ -0.4
P04214 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.54□□□□□ -0.4
P04214 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.54□□□□□ -0.4
P04214 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.54□□□□□ -0.4
P04214 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.54□□□□□ -0.4
P04214 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.54□□□□□ -0.4
P04214 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04214 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04214 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
P04214 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04214 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Gm24791-201ENSMUST00000104284 131 ntBASIC12.53□□□□□ -0.4
P04214 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.53□□□□□ -0.4
P04214 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
P04214 Gm7541-201ENSMUST00000118361 535 ntBASIC12.53□□□□□ -0.4
P04214 Gm11354-201ENSMUST00000121974 422 ntBASIC12.53□□□□□ -0.4
P04214 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.53□□□□□ -0.4
P04214 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Gm24248-201ENSMUST00000157321 322 ntBASIC12.53□□□□□ -0.4
P04214 Gm9192-201ENSMUST00000183221 985 ntBASIC12.53□□□□□ -0.4
P04214 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
P04214 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.53□□□□□ -0.4
P04214 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.53□□□□□ -0.4
P04214 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P04214 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04214 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.53□□□□□ -0.4
P04214 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
P04214 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
P04214 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04214 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.52□□□□□ -0.4
P04214 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
P04214 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.52□□□□□ -0.4
P04214 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04214 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.52□□□□□ -0.41
P04214 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04214 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P04214 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04214 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04214 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04214 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P04214 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms