Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
P01852 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01852 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.05□□□□□ -0.64
P01852 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.05□□□□□ -0.64
P01852 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
P01852 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P01852 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.05□□□□□ -0.64
P01852 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.05□□□□□ -0.64
P01852 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
P01852 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.05□□□□□ -0.64
P01852 Gm18711-201ENSMUST00000199341 750 ntBASIC11.05□□□□□ -0.64
P01852 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P01852 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.05□□□□□ -0.64
P01852 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P01852 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01852 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.04□□□□□ -0.64
P01852 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.04□□□□□ -0.64
P01852 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.04□□□□□ -0.64
P01852 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Gm11989-201ENSMUST00000117240 672 ntBASIC11.04□□□□□ -0.64
P01852 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.04□□□□□ -0.64
P01852 Gm11362-201ENSMUST00000118838 850 ntBASIC11.04□□□□□ -0.64
P01852 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms