Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.19□□□□□ -0.46
ChkaO54804 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.19□□□□□ -0.46
ChkaO54804 Mospd4-201ENSMUST00000180618 576 ntBASIC12.19□□□□□ -0.46
ChkaO54804 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Gm42693-201ENSMUST00000196779 631 ntBASIC12.19□□□□□ -0.46
ChkaO54804 Gm18711-201ENSMUST00000199341 750 ntBASIC12.19□□□□□ -0.46
ChkaO54804 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.19□□□□□ -0.46
ChkaO54804 Gm45880-201ENSMUST00000213041 853 ntBASIC12.19□□□□□ -0.46
ChkaO54804 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.19□□□□□ -0.46
ChkaO54804 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ChkaO54804 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ChkaO54804 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.19□□□□□ -0.46
ChkaO54804 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.19□□□□□ -0.46
ChkaO54804 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.19□□□□□ -0.46
ChkaO54804 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ChkaO54804 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ChkaO54804 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ChkaO54804 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.18□□□□□ -0.46
ChkaO54804 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ChkaO54804 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ChkaO54804 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Gm11793-201ENSMUST00000120433 981 ntBASIC12.18□□□□□ -0.46
ChkaO54804 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Gm19994-201ENSMUST00000217086 586 ntBASIC12.18□□□□□ -0.46
ChkaO54804 Gm9996-201ENSMUST00000070359 913 ntBASIC12.18□□□□□ -0.46
ChkaO54804 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.18□□□□□ -0.46
ChkaO54804 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.18□□□□□ -0.46
ChkaO54804 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ChkaO54804 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ChkaO54804 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ChkaO54804 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.17□□□□□ -0.46
ChkaO54804 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.17□□□□□ -0.46
ChkaO54804 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.17□□□□□ -0.46
ChkaO54804 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.17□□□□□ -0.46
ChkaO54804 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.17□□□□□ -0.46
ChkaO54804 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ChkaO54804 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.17□□□□□ -0.46
ChkaO54804 Gm17931-201ENSMUST00000208132 634 ntBASIC12.17□□□□□ -0.46
ChkaO54804 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.17□□□□□ -0.46
ChkaO54804 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.17□□□□□ -0.46
ChkaO54804 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.17□□□□□ -0.46
ChkaO54804 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ChkaO54804 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms