Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm29240-201ENSMUST00000187248 286 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm9136-201ENSMUST00000193368 454 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm6677-201ENSMUST00000195100 441 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm19617-201ENSMUST00000202977 308 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 AL929285.1-201ENSMUST00000215522 229 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 AC134537.1-201ENSMUST00000219205 265 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Nlrp9b-202ENSMUST00000117909 1506 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.61□□□□□ -0.07
Nkx1-1G3UXB3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm43255-201ENSMUST00000198885 1437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm44080-201ENSMUST00000204451 2214 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm11406-201ENSMUST00000117418 484 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm43079-201ENSMUST00000199794 559 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm2622-201ENSMUST00000200018 471 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm43478-201ENSMUST00000200381 292 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm17831-201ENSMUST00000205579 900 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 AC102369.1-201ENSMUST00000218415 373 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 AC107711.6-201ENSMUST00000228455 1088 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Ms4a4d-201ENSMUST00000025581 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 AC159624.1-201ENSMUST00000217762 1344 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Gm14976-201ENSMUST00000117055 1394 ntBASIC14.6□□□□□ -0.07
Nkx1-1G3UXB3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm11565-201ENSMUST00000105053 921 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm5761-201ENSMUST00000119238 834 ntBASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm24382-201ENSMUST00000122698 107 ntBASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm4726-201ENSMUST00000135604 736 ntBASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm6019-201ENSMUST00000148369 736 ntBASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC14.59□□□□□ -0.07
Nkx1-1G3UXB3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms