Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.12□□□□□ -0.63
TprF6ZDS4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.12□□□□□ -0.63
TprF6ZDS4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
TprF6ZDS4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm23119-201ENSMUST00000158610 140 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm38007-201ENSMUST00000192187 313 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 BC106175-202ENSMUST00000219344 1213 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm1848-201ENSMUST00000120711 789 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm8199-201ENSMUST00000121323 823 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm26368-201ENSMUST00000157826 118 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm3329-201ENSMUST00000159873 556 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TprF6ZDS4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TprF6ZDS4 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.11□□□□□ -0.63
TprF6ZDS4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TprF6ZDS4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TprF6ZDS4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TprF6ZDS4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TprF6ZDS4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
TprF6ZDS4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms