Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm1848-201ENSMUST00000120711 789 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm12516-201ENSMUST00000120819 385 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm8737-201ENSMUST00000122208 642 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm17877-201ENSMUST00000192578 814 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm9645-201ENSMUST00000197131 792 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm7902-201ENSMUST00000198842 947 ntBASIC10.82□□□□□ -0.68
Shank1D3YZU1 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.81□□□□□ -0.68
Shank1D3YZU1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm12407-201ENSMUST00000180219 324 ntBASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm29410-201ENSMUST00000188383 694 ntBASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm9111-201ENSMUST00000219394 709 ntBASIC10.81□□□□□ -0.68
Shank1D3YZU1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.81□□□□□ -0.68
Shank1D3YZU1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Shank1D3YZU1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms