Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm13315-201ENSMUST00000120376 991 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Proscos-202ENSMUST00000178990 666 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm9136-201ENSMUST00000193368 454 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm12887B1AVM1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.71□□□□□ -0.85
Gm12887B1AVM1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm13612-201ENSMUST00000119276 390 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm13369-201ENSMUST00000119442 987 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm16215-201ENSMUST00000161990 637 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm8420-201ENSMUST00000097103 598 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms