Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.58□□□□□ -0.4
Scn1aA2APX8 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.58□□□□□ -0.4
Scn1aA2APX8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1aA2APX8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Scn1aA2APX8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm29499-201ENSMUST00000189151 486 ntBASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm28329-201ENSMUST00000191208 689 ntBASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm29171-201ENSMUST00000191397 486 ntBASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Ginm1-202ENSMUST00000065124 300 ntBASIC12.57□□□□□ -0.4
Scn1aA2APX8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm22920-201ENSMUST00000102175 109 ntBASIC12.57□□□□□ -0.4
Scn1aA2APX8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm44126-201ENSMUST00000204831 514 ntBASIC12.57□□□□□ -0.4
Scn1aA2APX8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1aA2APX8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Gm24844-201ENSMUST00000158679 127 ntBASIC12.56□□□□□ -0.4
Scn1aA2APX8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.56□□□□□ -0.4
Scn1aA2APX8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.56□□□□□ -0.4
Scn1aA2APX8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.56□□□□□ -0.4
Scn1aA2APX8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.56□□□□□ -0.4
Scn1aA2APX8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn1aA2APX8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1aA2APX8 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.55□□□□□ -0.4
Scn1aA2APX8 Gm11960-201ENSMUST00000122068 925 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms