Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm23596-201ENSMUST00000104304 132 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm14724-201ENSMUST00000118400 537 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm25881-201ENSMUST00000157783 103 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm4482-201ENSMUST00000200876 742 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Gm807-202ENSMUST00000224929 408 ntBASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Slc25a53A2AF28 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm13035-201ENSMUST00000117496 342 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm9062-201ENSMUST00000117712 727 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm11660-201ENSMUST00000120955 412 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm5706-201ENSMUST00000181525 993 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm2965-201ENSMUST00000198365 343 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Slc25a53A2AF28 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc25a53A2AF28 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc25a53A2AF28 Gm24891-201ENSMUST00000104391 136 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms