Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm11978-201ENSMUST00000122315 466 ntBASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Trav6n-6A0A075B6B2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm8805-201ENSMUST00000117848 313 ntBASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm13369-201ENSMUST00000119442 987 ntBASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm29127-201ENSMUST00000188304 517 ntBASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm40466-201ENSMUST00000212174 422 ntBASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav6n-6A0A075B6B2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms