Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav5-4A0A075B652 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.15□□□□□ -0.79
Trav5-4A0A075B652 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm12314-201ENSMUST00000118104 538 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm13736-201ENSMUST00000119272 253 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Gm10076-201ENSMUST00000073238 384 ntBASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5-4A0A075B652 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5-4A0A075B652 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms