Protein–RNA interactions for Protein: Q9Z2V6

Hdac5, Histone deacetylase 5, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac5Q9Z2V6 Gm37002-201ENSMUST00000194560 373 ntBASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Gm10288-201ENSMUST00000084614 537 ntBASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac5Q9Z2V6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm5419-201ENSMUST00000119301 527 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm8502-201ENSMUST00000185708 901 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm8510-201ENSMUST00000189202 895 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm2316-201ENSMUST00000190613 921 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Gm44100-201ENSMUST00000204329 436 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 CT009713.8-201ENSMUST00000225448 560 ntBASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac5Q9Z2V6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hdac5Q9Z2V6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Gm11663-201ENSMUST00000117888 290 ntBASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Gm6506-201ENSMUST00000119775 1136 ntBASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Gm12164-201ENSMUST00000121695 551 ntBASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Gm5733-201ENSMUST00000190232 939 ntBASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 AC159819.2-201ENSMUST00000216151 342 ntBASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac5Q9Z2V6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Mir680-2-201ENSMUST00000102163 110 ntBASIC17.38■□□□□ 0.37
Hdac5Q9Z2V6 Gm23251-201ENSMUST00000103773 110 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms