Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim3Q9R1R2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim3Q9R1R2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.4□□□□□ -0.59
Trim3Q9R1R2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trim3Q9R1R2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim3Q9R1R2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim3Q9R1R2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.4□□□□□ -0.59
Trim3Q9R1R2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm20482-202ENSMUST00000174729 825 ntBASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm27243-201ENSMUST00000183964 521 ntBASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm27320-201ENSMUST00000184892 109 ntBASIC11.39□□□□□ -0.59
Trim3Q9R1R2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm37201-201ENSMUST00000191845 523 ntBASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim3Q9R1R2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Gm25043-201ENSMUST00000158604 212 ntBASIC11.38□□□□□ -0.59
Trim3Q9R1R2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim3Q9R1R2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms