Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.1□□□□□ -0.15
Scn11aQ9R053 Mir181d-201ENSMUST00000102383 72 ntBASIC14.1□□□□□ -0.15
Scn11aQ9R053 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm5257-201ENSMUST00000121823 790 ntBASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.1□□□□□ -0.15
Scn11aQ9R053 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn11aQ9R053 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm9089-201ENSMUST00000122027 526 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm35713-201ENSMUST00000210516 199 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn11aQ9R053 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.09□□□□□ -0.15
Scn11aQ9R053 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn11aQ9R053 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn11aQ9R053 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn11aQ9R053 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn11aQ9R053 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.08□□□□□ -0.15
Scn11aQ9R053 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn11aQ9R053 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scn11aQ9R053 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms