Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm12314-201ENSMUST00000118104 538 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm13342-201ENSMUST00000121055 207 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm38266-201ENSMUST00000194931 421 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm43758-201ENSMUST00000199500 367 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Morn2-202ENSMUST00000227729 656 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm12058-201ENSMUST00000118614 437 ntBASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm14999-201ENSMUST00000121039 624 ntBASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm7584-201ENSMUST00000175829 940 ntBASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm44958-201ENSMUST00000203734 736 ntBASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Gm44882-201ENSMUST00000205702 802 ntBASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a2Q9JLR1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a2Q9JLR1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a2Q9JLR1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Sec61a2Q9JLR1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Sec61a2Q9JLR1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a2Q9JLR1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a2Q9JLR1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms