Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm10169-201ENSMUST00000121822 348 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm16380-201ENSMUST00000077997 478 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm23272-201ENSMUST00000104053 129 ntBASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm15003-201ENSMUST00000118884 446 ntBASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-4Q9EQM3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Gm8574-201ENSMUST00000203207 924 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms