Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Gm2238-201ENSMUST00000192074 3669 ntBASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp4bQ9D8B3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm23270-201ENSMUST00000104055 131 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm14109-201ENSMUST00000118814 309 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm27046-201ENSMUST00000182160 463 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4bQ9D8B3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4bQ9D8B3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gm44806-201ENSMUST00000205574 2303 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gm11989-201ENSMUST00000117240 672 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gm11362-201ENSMUST00000118838 850 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4bQ9D8B3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms