Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.42□□□□□ -0.58
Upk1aQ9D132 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk1aQ9D132 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Btrc-209ENSMUST00000224478 2194 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm23912-201ENSMUST00000104687 87 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm5706-201ENSMUST00000181525 993 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm43002-201ENSMUST00000200310 155 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm45925-201ENSMUST00000218882 744 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm5781-201ENSMUST00000219792 443 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.41□□□□□ -0.58
Upk1aQ9D132 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk1aQ9D132 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm11478-201ENSMUST00000117851 599 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm12502-201ENSMUST00000120197 444 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.4□□□□□ -0.58
Upk1aQ9D132 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk1aQ9D132 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms