Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm11803-201ENSMUST00000119966 444 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm8810-201ENSMUST00000172895 754 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm9022-201ENSMUST00000182482 992 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm12203-201ENSMUST00000118235 598 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm12209-201ENSMUST00000120089 596 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm27243-201ENSMUST00000183964 521 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm10146-201ENSMUST00000072739 309 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.17□□□□□ -0.62
Trim13Q9CYB0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim13Q9CYB0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms