Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.1■□□□□ 0.17
Rtn4Q99P72 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm4986-201ENSMUST00000119731 549 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm11637-201ENSMUST00000120601 592 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm37042-201ENSMUST00000193816 581 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm18056-201ENSMUST00000207670 568 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm18061-201ENSMUST00000208350 562 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm18063-201ENSMUST00000208529 568 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm18052-201ENSMUST00000208750 559 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm8227-201ENSMUST00000223306 571 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn4Q99P72 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.09■□□□□ 0.17
Rtn4Q99P72 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn4Q99P72 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn4Q99P72 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn4Q99P72 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn4Q99P72 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rtn4Q99P72 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Rtn4Q99P72 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Gm13786-201ENSMUST00000122371 333 ntBASIC16.08■□□□□ 0.16
Rtn4Q99P72 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.08■□□□□ 0.16
Rtn4Q99P72 Gm18584-201ENSMUST00000203098 964 ntBASIC16.08■□□□□ 0.16
Rtn4Q99P72 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Gm45636-201ENSMUST00000210497 1064 ntBASIC16.08■□□□□ 0.16
Rtn4Q99P72 Gm19186-201ENSMUST00000219922 333 ntBASIC16.08■□□□□ 0.16
Rtn4Q99P72 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC16.08■□□□□ 0.16
Rtn4Q99P72 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC16.08■□□□□ 0.16
Rtn4Q99P72 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms