Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.28□□□□□ -0.44
Trem2Q99NH8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm11511-201ENSMUST00000118146 540 ntBASIC12.28□□□□□ -0.44
Trem2Q99NH8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm9192-201ENSMUST00000183221 985 ntBASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.28□□□□□ -0.44
Trem2Q99NH8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.28□□□□□ -0.44
Trem2Q99NH8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem2Q99NH8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.27□□□□□ -0.44
Trem2Q99NH8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trem2Q99NH8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm45598-202ENSMUST00000210719 986 ntBASIC12.27□□□□□ -0.45
Trem2Q99NH8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.27□□□□□ -0.45
Trem2Q99NH8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.27□□□□□ -0.45
Trem2Q99NH8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.27□□□□□ -0.45
Trem2Q99NH8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trem2Q99NH8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.26□□□□□ -0.45
Trem2Q99NH8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trem2Q99NH8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms