Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm24279-201ENSMUST00000104236 131 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm13204-201ENSMUST00000120110 821 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col25a1Q99MQ5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm14807-201ENSMUST00000116640 983 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm12857-201ENSMUST00000117678 592 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm22388-201ENSMUST00000158194 248 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm4775-201ENSMUST00000169588 402 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm38007-201ENSMUST00000192187 313 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col25a1Q99MQ5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms