Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm19309-201ENSMUST00000218295 205 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm13392-201ENSMUST00000117708 150 ntBASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm13736-201ENSMUST00000119272 253 ntBASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm45331-201ENSMUST00000209868 554 ntBASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm10478-201ENSMUST00000084451 396 ntBASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf111Q99ML9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Gm11793-201ENSMUST00000120433 981 ntBASIC11.71□□□□□ -0.53
Rnf111Q99ML9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Gm9022-201ENSMUST00000182482 992 ntBASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Gm38158-201ENSMUST00000194617 339 ntBASIC11.71□□□□□ -0.53
Rnf111Q99ML9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms