Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb6Q91XZ4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Mir1938-201ENSMUST00000158746 100 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm38317-201ENSMUST00000195564 343 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm43179-201ENSMUST00000198797 275 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm43822-201ENSMUST00000200285 476 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm7783-201ENSMUST00000204795 781 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm4607-201ENSMUST00000206649 577 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb6Q91XZ4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb6Q91XZ4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb6Q91XZ4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb6Q91XZ4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb6Q91XZ4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb6Q91XZ4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm14381-201ENSMUST00000122105 414 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm20482-202ENSMUST00000174729 825 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms