Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Gm38317-201ENSMUST00000195564 343 ntBASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhga4Q91XY4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm24231-201ENSMUST00000104315 133 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm11597-201ENSMUST00000121423 964 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm17376-201ENSMUST00000166016 84 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm44958-201ENSMUST00000203734 736 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhga4Q91XY4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.93□□□□□ -0.5
Pcdhga4Q91XY4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms