Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm18062-201ENSMUST00000208020 547 ntBASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm18055-201ENSMUST00000208254 547 ntBASIC12.49□□□□□ -0.41
Trim60Q8VI40 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.49□□□□□ -0.41
Trim60Q8VI40 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm13829-201ENSMUST00000119600 138 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm17150-201ENSMUST00000165577 381 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.48□□□□□ -0.41
Trim60Q8VI40 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim60Q8VI40 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.47□□□□□ -0.41
Trim60Q8VI40 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Gm27731-201ENSMUST00000185192 107 ntBASIC12.47□□□□□ -0.41
Trim60Q8VI40 Gm28882-201ENSMUST00000185504 314 ntBASIC12.47□□□□□ -0.41
Trim60Q8VI40 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim60Q8VI40 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim60Q8VI40 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms