Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm22331-201ENSMUST00000158066 136 ntBASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm37042-201ENSMUST00000193816 581 ntBASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh18Q8VHR0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gm24196-201ENSMUST00000179161 110 ntBASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Cog3-203ENSMUST00000227473 4197 ntBASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pcdh18Q8VHR0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm22121-201ENSMUST00000175148 54 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm27847-201ENSMUST00000183711 107 ntBASIC11.68□□□□□ -0.54
Pcdh18Q8VHR0 Gm27375-201ENSMUST00000183799 107 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms