Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Gm5369-201ENSMUST00000217499 588 ntBASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr1Q8VHP6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.9□□□□□ -0.51
Cdhr1Q8VHP6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdhr1Q8VHP6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cdhr1Q8VHP6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdhr1Q8VHP6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdhr1Q8VHP6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Gm13611-201ENSMUST00000118269 318 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Mir7677-201ENSMUST00000184226 67 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Gm44487-201ENSMUST00000205145 325 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr1Q8VHP6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 BC043934-202ENSMUST00000185694 2356 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm14058-201ENSMUST00000116082 735 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm9062-201ENSMUST00000117712 727 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Rprl1-201ENSMUST00000158050 327 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Mir1943-201ENSMUST00000158276 73 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Gm5523-201ENSMUST00000180415 997 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr1Q8VHP6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms