Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm39404-201ENSMUST00000216350 313 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdt1Q8R4E9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm7593-201ENSMUST00000187246 644 ntBASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdt1Q8R4E9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdt1Q8R4E9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms