Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ubqln1Q8R317 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Gm38241-201ENSMUST00000192641 898 ntBASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.48□□□□□ -0.57
Ubqln1Q8R317 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ubqln1Q8R317 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm23270-201ENSMUST00000104055 131 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm12015-201ENSMUST00000117065 843 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm7783-201ENSMUST00000204795 781 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ubqln1Q8R317 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.47□□□□□ -0.57
Ubqln1Q8R317 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms