Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup88Q8CEC0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Rmrp-201ENSMUST00000157463 271 ntBASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Gm44405-201ENSMUST00000198952 126 ntBASIC14.27□□□□□ -0.13
Nup88Q8CEC0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Gm8712-201ENSMUST00000221090 701 ntBASIC14.27□□□□□ -0.13
Nup88Q8CEC0 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup88Q8CEC0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Gm14028-201ENSMUST00000117434 479 ntBASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.26□□□□□ -0.13
Nup88Q8CEC0 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.26□□□□□ -0.13
Nup88Q8CEC0 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup88Q8CEC0 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Gm27341-201ENSMUST00000183570 106 ntBASIC14.25□□□□□ -0.13
Nup88Q8CEC0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Nsd1-205ENSMUST00000224693 852 ntBASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup88Q8CEC0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms